Aliases : HSS, ARF1-BP, ARF2, ORE14
Description : ARF-type transcription factor & original description: none
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00267580 | ARF19, IAA22,... | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00034p00110140 | ARF4 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00057p00141830 | HSS, ARF1-BP,... | RNA biosynthesis.transcriptional activation.B3... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00155p00082980 | ARF16,... | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
| AT4G23980 | ARF9 | auxin response factor 9 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G62000 | HSS, ARF1-BP, ARF2, ORE14 | auxin response factor 2 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g081361 | ARF10 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g103007 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g33345 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g02260 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g06737 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g22072 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g59651 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene46203.t1 | HSS, ARF1-BP,... | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene46204.t2 | HSS, ARF1-BP,... | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0065.g035933 | ARF6 | not classified & original description: CDS=1-678 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0697.g082598 | ARF16 | ARF-type transcription factor & original description: CDS=1-2376 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g78264 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.03G061000.1 | HSS, ARF1-BP,... | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G060100.1 | ARF1, Ceric.18G060100 | ARF-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.20G087500.1 | ARF1, Ceric.20G087500 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g23659 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g46643 | HSS, ARF1-BP, ARF2, ORE14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g08602 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g08681 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008639001 | HSS, ARF1-BP, ARF2, ORE14 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01015035001 | ARF19, IAA22, ARF11 | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01023149001 | ARF1 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01032251001 | ARF19, IAA22, ARF11 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g41800.1 | ARF16, LOC_Os02g41800 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07072 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g12750.1 | ARF6 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g10591 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g14175 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g42999 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g11300 | ARF10 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g17376 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g25160 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000212 | ARF4 | not classified & original description: CDS=1-1212 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g008995 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0068.g016361 | ARF16 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g12046 | No alias | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g12615 | ARF16 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g49441 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e006640_P002 | MP, IAA24, ARF5,... | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e014833_P002 | ARF1, Zm00001e014833 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e016366_P002 | ARF11, Zm00001e016366 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e017798_P003 | HSS, ARF1-BP,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e018761_P001 | HSS, ARF1-BP,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e028396_P001 | HSS, ARF1-BP,... | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030325_P003 | ARF6, Zm00001e030325 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| No external refs found! |
