Aliases : LRL3
Description : bHLH-type transcription factor & original description: none
Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00039p00032460 | PIL5, PIF1,... | External stimuli response.light.red/far red light.PIF... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g18078 | HEC2 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g01271 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g08656 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g13825 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g23333 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g58330.1 | UNE12, LOC_Os03g58330 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g39521 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g03327 | LRL3 | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g13442 | PIF3, POC1, PAP3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005046_P003 | PIL5, PIF1,... | transcription factor (bHLH). PIF red/far-red light... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e016160_P003 | SPT, Zm00001e016160 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000725 | recombinational repair | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004527 | exonuclease activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006310 | DNA recombination | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 47 | 92 |
| No external refs found! |
