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  5. Dde_g30819

Dde_g30819


Description : not classified & original description: none


Gene families : OG0000099 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g30819
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT1G60680 No alias NAD(P)-linked oxidoreductase superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g32670 ATB2 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.07 OrthoFinder output from all 47 species
Aob_g29748 ATB2 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
GSVIVT01021812001 No alias Probable aldo-keto reductase 1 OS=Glycine max 0.03 OrthoFinder output from all 47 species
GSVIVT01021816001 No alias Probable aldo-keto reductase 1 OS=Glycine max 0.03 OrthoFinder output from all 47 species
LOC_Os04g26870.1 LOC_Os04g26870 Probable aldo-keto reductase 1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os04g26890.1 LOC_Os04g26890 Probable aldo-keto reductase 2 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Lfl_g06882 ATB2 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
MA_168292g0010 ATB2 Probable aldo-keto reductase 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g36554 ATB2 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Ppi_g62106 ATB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g19123 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Sam_g36077 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Smo172677 ATB2 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
Solyc09g098000.4.1 ATB2, Solyc09g098000 Probable aldo-keto reductase 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g24457 ATB2 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Spa_g24459 ATB2 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR023210 NADP_OxRdtase_dom 24 140
No external refs found!