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  5. Lfl_g19360

Lfl_g19360


Description : subunit epsilon *(CCT5) of CCT chaperonin folding complex & original description: none


Gene families : OG0005131 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005131_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g19360

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00173980 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder output from all 47 species
AT1G24510 No alias TCP-1/cpn60 chaperonin family protein 0.04 OrthoFinder output from all 47 species
Ala_g06734 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.03 OrthoFinder output from all 47 species
Aop_g02559 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.02 OrthoFinder output from all 47 species
Ceric.01G032800.1 Ceric.01G032800 subunit epsilon *(CCT5) of CCT chaperonin folding... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000571.47 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder output from all 47 species
Cre03.g156750 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 OrthoFinder output from all 47 species
Dac_g03337 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.03 OrthoFinder output from all 47 species
Dcu_g05555 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.06 OrthoFinder output from all 47 species
GSVIVT01000590001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 OrthoFinder output from all 47 species
GSVIVT01020856001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 OrthoFinder output from all 47 species
Gb_40545 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
LOC_Os06g36700.1 LOC_Os06g36700 CCT5 subunit epsilon of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
MA_10435597g0010 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.02 OrthoFinder output from all 47 species
Mp7g17510.1 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Ore_g09320 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.05 OrthoFinder output from all 47 species
Pir_g11702 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.04 OrthoFinder output from all 47 species
Pp3c20_23570V3.1 Pp3c20_23570 TCP-1/cpn60 chaperonin family protein 0.01 OrthoFinder output from all 47 species
Smo158694 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 OrthoFinder output from all 47 species
Solyc05g013990.3.1 Solyc05g013990 CCT5 subunit epsilon of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species
Spa_g12182 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.07 OrthoFinder output from all 47 species
Tin_g01058 No alias subunit epsilon *(CCT5) of CCT chaperonin folding... 0.05 OrthoFinder output from all 47 species
Zm00001e011557_P001 Zm00001e011557 CCT5 subunit epsilon of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Zm00001e032727_P001 Zm00001e032727 CCT5 subunit epsilon of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0004146 dihydrofolate reductase activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009396 folic acid-containing compound biosynthetic process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046653 tetrahydrofolate metabolic process IEP HCCA
BP GO:0046654 tetrahydrofolate biosynthetic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 40 531
No external refs found!