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  5. Lfl_g19402

Lfl_g19402 (OTP84)


Aliases : OTP84

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g19402
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Adi_g002829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003807 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023352 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g046796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g050352 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g053630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066134 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082560 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16565 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24413 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24747 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36200 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47303 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03649 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16838 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68087 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34803.t1 Aspi01Gene34803 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42294.t1 Aspi01Gene42294 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67320.t1 EMB2758, Aspi01Gene67320 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07680 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g72718 MEF21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.18G033700.1 OTP86, Ceric.18G033700 not classified & original description: pacid=50622086... 0.03 OrthoFinder output from all 47 species
Ceric.27G036800.1 VAC1, ECB2,... not classified & original description: pacid=50605276... 0.03 OrthoFinder output from all 47 species
Ceric.30G017300.1 Ceric.30G017300 not classified & original description: pacid=50608904... 0.03 OrthoFinder output from all 47 species
Dac_g05707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27646 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09267 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g09658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18962 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02375 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05012 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07069 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07121 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07807 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13001 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28108 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33995 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g42421 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g45694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17377 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g44624 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23510 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g39379 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13010 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13456 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g51366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0117.g021130 No alias not classified & original description: CDS=1-2961 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0144.g022971 No alias not classified & original description: CDS=343-1173 0.03 OrthoFinder output from all 47 species
Sam_g48925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23796 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23271 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR046849 Eplus_motif 20 47
IPR032867 DYW_dom 51 123
No external refs found!