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  5. Dde_g38119

Dde_g38119


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g38119

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00090010 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
AT1G31010 OSB4 organellar single-stranded DNA binding protein 4 0.02 OrthoFinder output from all 47 species
AT4G18520 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G50990 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g005586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015739 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022884 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g024727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g050393 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g054918 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g080316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16565 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17191 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g30728 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36200 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27882 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25552 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g40212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g60598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67654 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene11731.t1 Aspi01Gene11731 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27883.t1 Aspi01Gene27883 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34804.t1 Aspi01Gene34804 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g016134 OTP84 not classified & original description: CDS=1-2358 0.02 OrthoFinder output from all 47 species
Azfi_s2932.g113765 CRR22 not classified & original description: CDS=1-1710 0.03 OrthoFinder output from all 47 species
Cba_g03910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07325 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G054900.1 DOT4, Ceric.17G054900 not classified & original description: pacid=50617812... 0.03 OrthoFinder output from all 47 species
Ceric.21G046800.1 Ceric.21G046800 not classified & original description: pacid=50603820... 0.04 OrthoFinder output from all 47 species
Ceric.34G047900.1 Ceric.34G047900 not classified & original description: pacid=50622720... 0.04 OrthoFinder output from all 47 species
Dac_g03344 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21461 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25885 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27446 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30446 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g31776 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g32529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g43234 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06677 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g15506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20585 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003453001 OTP80 RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
GSVIVT01025574001 No alias Pentatricopeptide repeat-containing protein At2g37320... 0.02 OrthoFinder output from all 47 species
GSVIVT01028697001 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.02 OrthoFinder output from all 47 species
Gb_19040 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Gb_32256 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
LOC_Os03g41530.1 LOC_Os03g41530 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
LOC_Os05g24890.1 LOC_Os05g24890 Pentatricopeptide repeat-containing protein At2g34400... 0.03 OrthoFinder output from all 47 species
LOC_Os09g07780.1 OTP84, LOC_Os09g07780 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
Len_g09279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g17928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05665 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07097 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07817 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19736 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g35930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g36302 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g36699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_38395g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_53781g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_863836g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
MA_9354530g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Msp_g04332 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g18814 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g25984 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28020 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35105 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g47672 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03158 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18275 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30346 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08923 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13456 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17865 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16300 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18659 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18869 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33646 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g35971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53359 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56081 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15522 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40196 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo75659 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc09g010070.1.1 EMB2758, Solyc09g010070 Pentatricopeptide repeat-containing protein At4g33990... 0.02 OrthoFinder output from all 47 species
Spa_g01903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g02187 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14725 MEF21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23159 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g30545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55036 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g06419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23118 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23771 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29863 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005071_P002 OSB1, Zm00001e005071 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Zm00001e007600_P001 Zm00001e007600 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Zm00001e018565_P001 Zm00001e018565 Pentatricopeptide repeat-containing protein At3g13880... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 246 293
IPR002885 Pentatricopeptide_repeat 145 191
IPR002885 Pentatricopeptide_repeat 46 76
IPR002885 Pentatricopeptide_repeat 119 144
IPR002885 Pentatricopeptide_repeat 18 39
IPR002885 Pentatricopeptide_repeat 322 343
IPR002885 Pentatricopeptide_repeat 220 242
No external refs found!