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  5. Dde_g39292

Dde_g39292


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g39292
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AT3G04450 No alias Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G13040 No alias myb-like HTH transcriptional regulator family protein 0.02 OrthoFinder output from all 47 species
Als_g32729 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g01648 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g04205 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene35965.t1 Aspi01Gene35965 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene55088.t1 Aspi01Gene55088 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene59765.t1 Aspi01Gene59765 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64388.t1 Aspi01Gene64388 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0401.g068282 KAN4, ATS KANADI-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g20180 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.10G068700.1 Ceric.10G068700 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.12G062400.1 Ceric.12G062400 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.22G040100.1 Ceric.22G040100 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g44014 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17436 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01011163001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
LOC_Os02g04640.1 LOC_Os02g04640 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os06g45890.1 LOC_Os06g45890 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os09g12770.1 LOC_Os09g12770 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Len_g40903 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01961 PHR1, AtPHR1 transcription factor *(PHR1) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g32204 KAN2 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25465 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g40619 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc07g045000.4.1 Solyc07g045000 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
Spa_g04247 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g22319 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Tin_g03896 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e035893_P001 Zm00001e035893 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 357 407
IPR025756 Myb_CC_LHEQLE 438 484
No external refs found!