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  5. Dde_g41229

Dde_g41229


Description : component *(PetM/VII) of cytochrome b6/f complex & original description: none


Gene families : OG0007944 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007944_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g41229
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AT2G26500 No alias cytochrome b6f complex subunit (petM), putative 0.04 OrthoFinder output from all 47 species
Aev_g07600 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.05 OrthoFinder output from all 47 species
Ala_g12927 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.06 OrthoFinder output from all 47 species
Als_g54693 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.06 OrthoFinder output from all 47 species
Aop_g09963 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.13 OrthoFinder output from all 47 species
Azfi_s0034.g025256 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.07 OrthoFinder output from all 47 species
Cba_g44231 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.04 OrthoFinder output from all 47 species
Ceric.32G011800.1 Ceric.32G011800 component *(PetM/VII) of cytochrome b6/f complex &... 0.05 OrthoFinder output from all 47 species
Dcu_g00281 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01009587001 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.05 OrthoFinder output from all 47 species
Gb_00822 No alias component PetM/VII of cytochrome b6/f complex 0.03 OrthoFinder output from all 47 species
LOC_Os03g55720.2 LOC_Os03g55720 component PetM/VII of cytochrome b6/f complex 0.08 OrthoFinder output from all 47 species
Len_g11628 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.07 OrthoFinder output from all 47 species
Len_g29641 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.08 OrthoFinder output from all 47 species
MA_10294942g0010 No alias component PetM/VII of cytochrome b6/f complex 0.06 OrthoFinder output from all 47 species
Mp1g07170.1 No alias component PetM/VII of cytochrome b6/f complex 0.11 OrthoFinder output from all 47 species
Nbi_g20551 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.08 OrthoFinder output from all 47 species
Ore_g17180 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.04 OrthoFinder output from all 47 species
Pir_g19323 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.11 OrthoFinder output from all 47 species
Pnu_g06190 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.03 OrthoFinder output from all 47 species
Ppi_g55276 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.04 OrthoFinder output from all 47 species
Smo438339 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
Solyc01g109040.4.1 Solyc01g109040 component PetM/VII of cytochrome b6/f complex 0.12 OrthoFinder output from all 47 species
Tin_g27169 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.13 OrthoFinder output from all 47 species
Zm00001e011966_P002 Zm00001e011966 component PetM/VII of cytochrome b6/f complex 0.05 OrthoFinder output from all 47 species
Zm00001e011967_P001 Zm00001e011967 component PetM/VII of cytochrome b6/f complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009512 cytochrome b6f complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012595 PetM_cyt_b6/f_cplx_su7 134 160
No external refs found!