Dde_g42048 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g42048
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
Adi_g002869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003872 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036766 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g040704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g049842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057083 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060808 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g065393 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g078896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g096157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21253 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39900 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g18705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16176 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16691 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26368 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000999 No alias not classified & original description: CDS=128-2962 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012490 No alias not classified & original description: CDS=1-2382 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012535 No alias not classified & original description: CDS=1-2328 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g016134 OTP84 not classified & original description: CDS=1-2358 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025464 No alias not classified & original description: CDS=1-2154 0.04 OrthoFinder output from all 47 species
Azfi_s0036.g025743 No alias not classified & original description: CDS=1-2553 0.03 OrthoFinder output from all 47 species
Azfi_s0054.g033567 EMB2758 not classified & original description: CDS=1-2352 0.03 OrthoFinder output from all 47 species
Azfi_s0117.g046569 No alias not classified & original description: CDS=1-2520 0.03 OrthoFinder output from all 47 species
Azfi_s0139.g051178 No alias not classified & original description: CDS=1-2667 0.03 OrthoFinder output from all 47 species
Azfi_s0210.g058082 No alias not classified & original description: CDS=1-2637 0.03 OrthoFinder output from all 47 species
Ceric.05G026100.1 Ceric.05G026100 not classified & original description: pacid=50577264... 0.04 OrthoFinder output from all 47 species
Ceric.07G081900.1 Ceric.07G081900 not classified & original description: pacid=50627936... 0.03 OrthoFinder output from all 47 species
Ceric.09G062300.1 Ceric.09G062300 not classified & original description: pacid=50587557... 0.03 OrthoFinder output from all 47 species
Ceric.10G022300.1 Ceric.10G022300 not classified & original description: pacid=50612428... 0.04 OrthoFinder output from all 47 species
Ceric.28G044700.1 Ceric.28G044700 not classified & original description: pacid=50570014... 0.03 OrthoFinder output from all 47 species
Ceric.30G037100.1 Ceric.30G037100 not classified & original description: pacid=50608918... 0.04 OrthoFinder output from all 47 species
Ceric.33G057300.1 Ceric.33G057300 not classified & original description: pacid=50607177... 0.03 OrthoFinder output from all 47 species
Dac_g03211 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18423 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18763 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30287 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32437 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32771 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36017 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43249 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43504 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22855 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50137 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21519 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12128 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21131 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g04809 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g48855 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07429 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_668740g0020 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Msp_g24078 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28331 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05829 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06160 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06311 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07857 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09775 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16605 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16742 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g18381 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g20508 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g21521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23766 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24057 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27539 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g27832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27836 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g29244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32358 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g44630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64857 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06866 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15048 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30441 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g46005 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001739 No alias not classified & original description: CDS=1-1443 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006560 No alias not classified & original description: CDS=1-2253 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013917 No alias not classified & original description: CDS=1-2493 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0225.g026308 CRR22 ssDNA-binding protein *(OSB) & original description: CDS=95-2287 0.03 OrthoFinder output from all 47 species
Sam_g26608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g11708 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g13768 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17936 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23113 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23800 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33278 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g44644 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55549 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g04725 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g06074 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12955 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g30255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029119_P001 Zm00001e029119 Pentatricopeptide repeat-containing protein At2g33760... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 591 638
IPR002885 Pentatricopeptide_repeat 285 331
IPR002885 Pentatricopeptide_repeat 187 233
IPR002885 Pentatricopeptide_repeat 488 535
IPR002885 Pentatricopeptide_repeat 161 186
IPR002885 Pentatricopeptide_repeat 463 487
IPR002885 Pentatricopeptide_repeat 361 382
IPR002885 Pentatricopeptide_repeat 87 117
IPR002885 Pentatricopeptide_repeat 665 689
IPR002885 Pentatricopeptide_repeat 390 419
No external refs found!