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  5. Dde_g46917

Dde_g46917


Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g46917

Target Alias Description ECC score Gene Family Method Actions
AT1G77150 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.1 OrthoFinder output from all 47 species
AT3G08820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.08 OrthoFinder output from all 47 species
AT3G20730 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g005647 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005661 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23888 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19004 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g26559 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30723 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g03162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04618 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g27035 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g17225 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29421 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g59978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30491 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13146 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_11981 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.06 OrthoFinder output from all 47 species
Len_g09420 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18815 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g20208 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06151 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06223 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g07095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08499 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10361 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g31355 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g35187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39111 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40816 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03043 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03367 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g05347 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08923 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10372 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g16678 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18087 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20201 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20288 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33469 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34327 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g45444 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g12166 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03245 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53555 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g02187 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g07311 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14725 MEF21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23688 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23949 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23972 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24095 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g28110 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g30016 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g32786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g42432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05979 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g09254 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g29866 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000424 Primosome_PriB/ssb 44 137
No external refs found!