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  5. Dde_g49909

Dde_g49909


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g49909

Target Alias Description ECC score Gene Family Method Actions
Aev_g42949 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g25155 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04634 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g13662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.22G020200.1 Ceric.22G020200 not classified & original description: pacid=50615278... 0.03 OrthoFinder output from all 47 species
Dcu_g06339 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08616 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g43978 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g12887 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g15529 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g15725 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g40764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17818 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g20192 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g29664 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32016 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32051 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g32187 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g42021 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g16384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57720 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29356 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016469 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2448 0.05 OrthoFinder output from all 47 species
Sam_g16744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo91949 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Solyc03g096610.2.1 Solyc03g096610 Pentatricopeptide repeat-containing protein At1g33350... 0.04 OrthoFinder output from all 47 species
Spa_g13637 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g33712 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g54818 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g56533 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g05859 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g35364 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e031693_P001 Zm00001e031693 Pentatricopeptide repeat-containing protein At4g14050,... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 430 476
IPR002885 Pentatricopeptide_repeat 328 374
IPR002885 Pentatricopeptide_repeat 225 272
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 124 170
IPR002885 Pentatricopeptide_repeat 302 327
No external refs found!