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  5. Dde_g49989

Dde_g49989 (OTP84)


Aliases : OTP84

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g49989
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Aob_g26992 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0652.g081079 No alias not classified & original description: CDS=1-2169 0.02 OrthoFinder output from all 47 species
Cba_g07683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19801 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20706 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.02 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g19380.1 LOC_Os01g19380 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os08g06490.2 SLO1, LOC_Os08g06490 Pentatricopeptide repeat-containing protein At4g22760... 0.02 OrthoFinder output from all 47 species
LOC_Os12g15460.1 LOC_Os12g15460 Pentatricopeptide repeat-containing protein At1g18485... 0.02 OrthoFinder output from all 47 species
Nbi_g06302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17942 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44090 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 346 367
IPR002885 Pentatricopeptide_repeat 244 265
IPR002885 Pentatricopeptide_repeat 449 471
IPR002885 Pentatricopeptide_repeat 65 112
IPR002885 Pentatricopeptide_repeat 167 216
IPR002885 Pentatricopeptide_repeat 270 317
IPR002885 Pentatricopeptide_repeat 372 419
IPR002885 Pentatricopeptide_repeat 475 522
No external refs found!