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  5. Dde_g50936

Dde_g50936


Description : not classified & original description: none


Gene families : OG0000494 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000494_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g50936
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00092720 evm_27.TU.AmTr_v1... Calmodulin-binding protein 60 B OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00090p00167270 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G73805 No alias Calmodulin binding protein-like 0.04 OrthoFinder output from all 47 species
AT2G24300 No alias Calmodulin-binding protein 0.02 OrthoFinder output from all 47 species
AT5G26920 CBP60G Cam-binding protein 60-like G 0.03 OrthoFinder output from all 47 species
AT5G57580 No alias Calmodulin-binding protein 0.02 OrthoFinder output from all 47 species
AT5G62570 No alias Calmodulin binding protein-like 0.06 OrthoFinder output from all 47 species
Ala_g07165 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Ala_g16876 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g31068 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g09924 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Als_g22997 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Aop_g69471 No alias regulatory protein *(CBP60) of systemic acquired... 0.04 OrthoFinder output from all 47 species
Aspi01Gene54819.t1 Aspi01Gene54819 regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Cba_g21866 No alias regulatory protein *(CBP60) of systemic acquired... 0.04 OrthoFinder output from all 47 species
Ceric.30G012100.1 Ceric.30G012100 regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Ceric.31G030200.1 Ceric.31G030200 regulatory protein *(CBP60) of systemic acquired... 0.05 OrthoFinder output from all 47 species
Dde_g03333 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Dde_g30637 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Ehy_g01401 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Ehy_g03713 No alias regulatory protein *(CBP60) of systemic acquired... 0.04 OrthoFinder output from all 47 species
GSVIVT01003722001 No alias Calmodulin-binding protein 60 E OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01008322001 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01008324001 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01029152001 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01031210001 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_39213 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_40744 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os01g04280.1 LOC_Os01g04280 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os08g27170.1 LOC_Os08g27170 Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g13890.1 LOC_Os09g13890 Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os11g44170.1 LOC_Os11g44170 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os11g44200.1 LOC_Os11g44200 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g44600.1 LOC_Os11g44600 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g36110.1 LOC_Os12g36110 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_18754g0010 No alias Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_23963g0010 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MpVg00510.1 No alias No annotation 0.02 OrthoFinder output from all 47 species
Pir_g14501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g30187 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Sam_g51653 No alias regulatory protein *(CBP60) of systemic acquired... 0.02 OrthoFinder output from all 47 species
Solyc02g079040.3.1 Solyc02g079040 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g113980.3.1 Solyc03g113980 Calmodulin-binding protein 60 A OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc03g119250.4.1 Solyc03g119250 Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc10g009210.4.1 Solyc10g009210 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Tin_g07205 No alias regulatory protein *(CBP60) of systemic acquired... 0.06 OrthoFinder output from all 47 species
Zm00001e004278_P001 Zm00001e004278 Calmodulin-binding protein 60 C OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e013802_P001 Zm00001e013802 Calmodulin-binding protein 60 C OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e039693_P002 Zm00001e039693 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR046831 Calmodulin_bind_N 84 165
No external refs found!