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  5. Lfl_g20886

Lfl_g20886


Description : not classified & original description: none


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g20886
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT5G54430 PHOS32, ATPHOS32 Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g19519 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15372.t1 Aspi01Gene15372 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g00336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_20328 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_20331 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g32780.1 LOC_Os01g32780 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g63010.1 LOC_Os01g63010 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g07810.1 LOC_Os05g07810 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g15129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435390g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_139433g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_18127g0010 RD2 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g10800.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g00168 RD2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016731 No alias not classified & original description: CDS=1-588 0.04 OrthoFinder output from all 47 species
Solyc04g076200.3.1 Solyc04g076200 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g12961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g39092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0015926 glucosidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030151 molybdenum ion binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051118 glucan endo-1,3-alpha-glucosidase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 45 197
No external refs found!