Aliases : OTP86
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00235510 | OTP84,... | Pentatricopeptide repeat-containing protein DOT4,... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G31920 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT2G33760 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G18750 | DOT4 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G39952 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G40410 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G66520 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g035608 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g31186 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g03812 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g55311 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g58851 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g61706 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g05483 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g16103 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g21870 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g22269 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene51735.t1 | Aspi01Gene51735 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene64343.t1 | Aspi01Gene64343 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene66061.t1 | Aspi01Gene66061 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0125.g048584 | CRR22 | not classified & original description: CDS=1-1611 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0529.g075791 | No alias | protein involved in PS-I assembly *(PYG7) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.10G062000.1 | Ceric.10G062000 | ssDNA-binding protein *(OSB) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g04207 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g46646 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_11688 | CRR2 | OTP70 plastidial RNA splicing factor | 0.03 | OrthoFinder output from all 47 species | |
| Gb_14172 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_14867 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_27322 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_33210 | OTP84 | RNA editing factor (OTP82) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_38680 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_39402 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g46980.1 | LOC_Os02g46980 | Pentatricopeptide repeat-containing protein At1g31920... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18973 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_109016g0020 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g22072 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g27459 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g23954 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06965 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g48248 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g63100 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0006.g002995 | DOT4 | not classified & original description: CDS=1-2349 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0006.g003208 | No alias | monogalactosyldiacylglycerol lipase *(HIL1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0013.g005856 | No alias | not classified & original description: CDS=1-2292 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0018.g007537 | No alias | not classified & original description: CDS=117-2237 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g11238 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo115259 | CRR2 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e010837_P001 | LPA66, Zm00001e010837 | Pentatricopeptide repeat-containing protein At5g48910... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e022253_P001 | Zm00001e022253 | Pentatricopeptide repeat-containing protein At1g59720,... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e029119_P001 | Zm00001e029119 | Pentatricopeptide repeat-containing protein At2g33760... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e029450_P001 | Zm00001e029450 | Pentatricopeptide repeat-containing protein At2g46050,... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030887_P001 | Zm00001e030887 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| MF | GO:0071949 | FAD binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 365 | 411 |
| IPR002885 | Pentatricopeptide_repeat | 465 | 510 |
| IPR002885 | Pentatricopeptide_repeat | 567 | 614 |
| IPR002885 | Pentatricopeptide_repeat | 164 | 211 |
| IPR002885 | Pentatricopeptide_repeat | 642 | 664 |
| IPR002885 | Pentatricopeptide_repeat | 238 | 261 |
| IPR002885 | Pentatricopeptide_repeat | 541 | 563 |
| IPR002885 | Pentatricopeptide_repeat | 266 | 295 |
| No external refs found! |
