Aliases : LOP1, TRN1
Description : not classified & original description: none
Gene families : OG0000350 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000350_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dde_g52046 | |
| Cluster | HCCA: Cluster_58 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ala_g11130 | LOP1, TRN1 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g35639 | LOP1, TRN1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.18G016100.1 | LOP1, TRN1,... | not classified & original description: pacid=50621243... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g39942 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g32964 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g112750.4.1 | LOP1, TRN1,... | Protein TORNADO 1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g25087 | LOP1, TRN1 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0035673 | oligopeptide transmembrane transporter activity | IEP | HCCA |
| MF | GO:0042887 | amide transmembrane transporter activity | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| MF | GO:1904680 | peptide transmembrane transporter activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
