Dde_g52100 (ABCB19, ATABCB19,...)

Aliases : ABCB19, ATABCB19, MDR1, MDR11, ATPGP19, ATMDR1, ATMDR11, PGP19

Description : subfamily ABCB transporter & original description: none

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dde_g52100

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00108620	PGP11,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AMTR_s00045p00109940	PGP11,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
AT1G27940	PGP13	P-glycoprotein 13	0.02	OrthoFinder output from all 47 species
AT4G01830	PGP5	P-glycoprotein 5	0.03	OrthoFinder output from all 47 species
AT4G18050	PGP9	P-glycoprotein 9	0.02	OrthoFinder output from all 47 species
AT5G46540	PGP7	P-glycoprotein 7	0.03	OrthoFinder output from all 47 species
Adi_g021749	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g060981	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g07132	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g26174	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g32929	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene08469.t1	PGP11, Aspi01Gene08469	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene15961.t1	ABCB19,...	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene28299.t1	Aspi01Gene28299	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0208.g057960	PGP2	not classified & original description: CDS=388-3987	0.03	OrthoFinder output from all 47 species
Cba_g07645	PGP13	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.36G025500.1	PGP2, Ceric.36G025500	subfamily ABCB transporter & original description:...	0.03	OrthoFinder output from all 47 species
GSVIVT01013125001	PGP2	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
GSVIVT01021365001	PGP9	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Gb_02468	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
LOC_Os02g21750.1	PGP11, LOC_Os02g21750	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
LOC_Os04g38570.1	ABCB19,...	auxin efflux transporter (ABCB19)	0.02	OrthoFinder output from all 47 species
Len_g12935	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g21852	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
MA_18863g0020	PGP3, MDR3	ABC transporter B family member 3 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_8519205g0010	PGP17	ABC transporter B family member 17 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_934204g0010	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Nbi_g28031	ABCB19,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g09820	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g03284	PGP13	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g04001	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012919	ABCB19,...	subfamily ABCB transporter & original description: CDS=118-4143	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019194	No alias	not classified & original description: CDS=54-1700	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0141.g022750	PGP11	subfamily ABCB transporter & original description: CDS=1-3756	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022862	No alias	not classified & original description: CDS=281-511	0.02	OrthoFinder output from all 47 species
Sam_g04293	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Smo148837	ABCB19,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Smo410515	ABCB19,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Smo99885	No alias	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Solyc06g009280.1.1	PGP11, Solyc06g009280	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Solyc08g076720.4.1	PGP2, Solyc08g076720	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Solyc11g067300.2.1	PGP11, Solyc11g067300	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Spa_g19381	PGP11	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g48523	PGP13	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g38947	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e020073_P001	ATPGP4, PGP4,...	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Zm00001e023274_P001	PGP2, Zm00001e023274	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Zm00001e025063_P001	Zm00001e025063	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Zm00001e041008_P003	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000808	origin recognition complex	IEP	HCCA
CC	GO:0005664	nuclear origin of replication recognition complex	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009733	response to auxin	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	464	612
IPR003439	ABC_transporter-like_ATP-bd	1121	1269
IPR011527	ABC1_TM_dom	780	1052
IPR011527	ABC1_TM_dom	121	394

External Links

No external refs found!

Dde_g52100 (ABCB19, ATABCB19,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation