Aliases : NCLPP1, CLPP5, NCLPP5
Description : proteolytic core component *(ClpP1/3-6) of chloroplast Clp-type protease complex & original description: none
Gene families : OG0000552 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000552_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G02560 | NCLPP1, CLPP5, NCLPP5 | nuclear encoded CLP protease 5 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0454.g071292 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g04410 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.06 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020553.201 | NCLPP4, CLPP4 | ATP-dependent Clp protease proteolytic subunit 4,... | 0.01 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021522.2 | NCLPP1, CLPP5, NCLPP5 | ATP-dependent Clp protease proteolytic subunit 5,... | 0.01 | OrthoFinder output from all 47 species | |
| Len_g18844 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| MA_12147g0010 | NCLPP4, CLPP4 | ATP-dependent Clp protease proteolytic subunit 4,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_140852g0010 | NCLPP4, CLPP4 | ATP-dependent Clp protease proteolytic subunit 4,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_806g0010 | NCLPP1, CLPP5, NCLPP5 | ATP-dependent Clp protease proteolytic subunit 5,... | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g12460.1 | NCLPP4, CLPP4 | proteolytic core component ClpP1/3-6 of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g07790.1 | CLPP3, NCLPP3 | proteolytic core component ClpP1/3-6 of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0147.g023180 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g06534 | No alias | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0042586 | peptide deformylase activity | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023562 | ClpP/TepA | 107 | 285 |
| No external refs found! |
