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  5. Aob_g01685

Aob_g01685 (PUB8, B80)


Aliases : PUB8, B80

Description : E3 ubiquitin ligase *(PUB8) & original description: none


Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g01685
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00030110 PUB15,... U-box domain-containing protein 15 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00007p00217990 evm_27.TU.AmTr_v1... U-box domain-containing protein 16 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00086p00031680 evm_27.TU.AmTr_v1... U-box domain-containing protein 4 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00135p00108920 PUB13, ATPUB13,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00153p00035720 ATPUB17, PUB17,... U-box domain-containing protein 1 OS=Medicago truncatula 0.03 OrthoFinder output from all 47 species
AT1G10560 PUB18, ATPUB18 plant U-box 18 0.03 OrthoFinder output from all 47 species
AT1G60190 No alias ARM repeat superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G01830 No alias ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G58680 No alias ARM repeat superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g017517 ATPUB17, PUB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g019046 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g026489 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102535 ATPUB17, PUB17 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g05159 PUB12, AtPUB12 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aev_g09883 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g04410 PUB14, ATPUB14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08869 PUB15 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03799 ATPUB17, PUB17 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07222 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09506 PUB13, ATPUB13 E3 ubiquitin ligase *(PUB8) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g16594 PUB14, ATPUB14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00484 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g19192 ATPUB17, PUB17 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01377.t1 PUB14, ATPUB14,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43158.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44181.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44183.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44184.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44185.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene65975.t1 PUB8, B80,... E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72934.t1 PUB13, ATPUB13,... E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s2565.g112179 No alias not classified & original description: CDS=1-438 0.02 OrthoFinder output from all 47 species
Ceric.10G010300.1 ATPUB17, PUB17,... not classified & original description: pacid=50611933... 0.05 OrthoFinder output from all 47 species
Ceric.26G012900.1 Ceric.26G012900 not classified & original description: pacid=50598948... 0.03 OrthoFinder output from all 47 species
Ceric.35G012000.1 PUB13, ATPUB13,... E3 ubiquitin ligase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.35G034600.1 PUB18, ATPUB18,... not classified & original description: pacid=50581001... 0.03 OrthoFinder output from all 47 species
Dac_g08480 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g35977 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g39000 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g26575 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06164 ATPUB17, PUB17 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11164 PUB12, AtPUB12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13215 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22153 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g29208 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01006481001 PUB8, B80 U-box domain-containing protein 8 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01021265001 ATPUB17, PUB17 U-box domain-containing protein 17 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01036669001 No alias U-box domain-containing protein 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_10627 PUB8, B80 U-box domain-containing protein 13 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_29276 ATPUB17, PUB17 E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g39930.1 LOC_Os05g39930 U-box domain-containing protein 16 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g20959 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
MA_84321g0010 PUB13, ATPUB13 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Msp_g01206 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g08607 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g16068 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g37725 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38088 ATPUB17, PUB17 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25617 ATPUB17, PUB17 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g36544 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14774 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30958 PUB13, ATPUB13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo415326 ATPUB17, PUB17 U-box domain-containing protein 1 OS=Medicago truncatula 0.03 OrthoFinder output from all 47 species
Solyc02g072080.1.1 ATPUB17, PUB17,... U-box domain-containing protein 17 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc04g077850.3.1 Solyc04g077850 U-box domain-containing protein 4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc09g056450.4.1 PUB9, ATPUB9,... U-box domain-containing protein 9 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g25117 PUB14, ATPUB14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02458 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21993 PUB13, ATPUB13 E3 ubiquiTin ligase *(PUB15) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018578_P001 Zm00001e018578 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e019429_P001 Zm00001e019429 U-box domain-containing protein 16 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e028839_P001 Zm00001e028839 U-box domain-containing protein 16 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e034012_P001 Zm00001e034012 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 5 72
IPR000225 Armadillo 303 342
No external refs found!