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  5. Aob_g02168

Aob_g02168 (ATSS4, SS4, SSIV)


Aliases : ATSS4, SS4, SSIV

Description : not classified & original description: none


Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g02168

Target Alias Description ECC score Gene Family Method Actions
AT4G18240 ATSS4, SS4, SSIV starch synthase 4 0.03 OrthoFinder output from all 47 species
Aev_g19510 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13690 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18951 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02616 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57843 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18815 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14554 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g13857 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g39006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02313 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09774 ATSS4, SS4, SSIV not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12029 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12030 No alias starch synthase *(SS5) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51042 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g071040.3.1 ATSS4, SS4,... starch synthase (SSIV) 0.03 OrthoFinder output from all 47 species
Spa_g26732 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02018 ATSS4, SS4, SSIV not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 158 386
IPR001296 Glyco_trans_1 461 612
No external refs found!