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  5. Aob_g02188

Aob_g02188 (AT-GTL1, GTL1, AT-GTL2)


Aliases : AT-GTL1, GTL1, AT-GTL2

Description : Trihelix-type transcription factor & original description: none


Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g02188

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00088210 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.03 OrthoFinder output from all 47 species
AMTR_s00041p00147950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.02 OrthoFinder output from all 47 species
Adi_g047696 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22378 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10965 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g59070 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27191.t1 Aspi01Gene27191 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g08402 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g72625 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.35G006300.1 Ceric.35G006300 Trihelix-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g08646 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24833 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26898 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01026588001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.03 OrthoFinder output from all 47 species
GSVIVT01035465001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.03 OrthoFinder output from all 47 species
Lfl_g06235 AT-GTL1, GTL1, AT-GTL2 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06014 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59710 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g65125 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60651 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023745 No alias Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g36812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g19131 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 160 245
IPR044822 Myb_DNA-bind_4 447 533
No external refs found!