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  5. Aob_g02207

Aob_g02207


Description : RING-H2-class CTL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000374 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g02207

Target Alias Description ECC score Gene Family Method Actions
Adi_g024316 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Adi_g114072 No alias regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... 0.03 OrthoFinder output from all 47 species
Aev_g07976 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ala_g10098 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aop_g04919 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Cba_g07264 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Cba_g16424 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Cba_g16820 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Cba_g36468 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.26G008400.1 Ceric.26G008400 RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g43069 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dde_g01694 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dde_g11830 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
GSVIVT01011840001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Len_g20475 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Len_g29893 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Msp_g11041 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Nbi_g04359 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g10482 No alias regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... 0.04 OrthoFinder output from all 47 species
Ore_g19183 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g09720 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sam_g12356 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Solyc10g050170.3.1 Solyc10g050170 E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc12g014070.2.1 Solyc12g014070 Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... 0.04 OrthoFinder output from all 47 species
Solyc12g096420.2.1 Solyc12g096420 Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.01 OrthoFinder output from all 47 species
Spa_g10863 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Zm00001e013672_P001 Zm00001e013672 Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 720 762
No external refs found!