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  5. Aob_g02393

Aob_g02393


Description : component *(SF3B1) of splicing factor 3B complex & original description: none


Gene families : OG0002634 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002634_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g02393

Target Alias Description ECC score Gene Family Method Actions
AT5G64270 No alias splicing factor, putative 0.03 OrthoFinder output from all 47 species
Adi_g087263 No alias component *(SF3B1) of splicing factor 3B complex &... 0.03 OrthoFinder output from all 47 species
Adi_g104747 No alias component *(SF3B1) of splicing factor 3B complex &... 0.03 OrthoFinder output from all 47 species
Ala_g02669 No alias component *(SF3B1) of splicing factor 3B complex &... 0.03 OrthoFinder output from all 47 species
Als_g58968 No alias component *(SF3B1) of splicing factor 3B complex &... 0.03 OrthoFinder output from all 47 species
Aop_g71156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g08997 No alias component *(SF3B1) of splicing factor 3B complex &... 0.02 OrthoFinder output from all 47 species
Cba_g25739 No alias component *(SF3B1) of splicing factor 3B complex &... 0.07 OrthoFinder output from all 47 species
Ceric.02G008400.1 Ceric.02G008400 component *(SF3B1) of splicing factor 3B complex &... 0.05 OrthoFinder output from all 47 species
Dac_g02908 No alias component *(SF3B1) of splicing factor 3B complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g02942 No alias component *(SF3B1) of splicing factor 3B complex &... 0.04 OrthoFinder output from all 47 species
GSVIVT01025852001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.04 OrthoFinder output from all 47 species
Gb_12533 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_14294 No alias component SF3B1 of splicing factor 3B complex 0.04 OrthoFinder output from all 47 species
Gb_20157 No alias component SF3B1 of splicing factor 3B complex 0.03 OrthoFinder output from all 47 species
LOC_Os02g05310.4 LOC_Os02g05310 component SF3B1 of splicing factor 3B complex 0.04 OrthoFinder output from all 47 species
Len_g38026 No alias component *(SF3B1) of splicing factor 3B complex &... 0.03 OrthoFinder output from all 47 species
Nbi_g04463 No alias component *(SF3B1) of splicing factor 3B complex &... 0.03 OrthoFinder output from all 47 species
Pir_g13624 No alias component *(SF3B1) of splicing factor 3B complex &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000478 No alias component *(SF3B1) of splicing factor 3B complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e025224_P001 Zm00001e025224 component SF3B1 of splicing factor 3B complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR015016 SF3b_su1 293 424
No external refs found!