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  5. Aob_g02623

Aob_g02623


Description : not classified & original description: none


Gene families : OG0001109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g02623

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00234p00014000 evm_27.TU.AmTr_v1... Calcium-binding protein KIC OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT4G27280 No alias Calcium-binding EF-hand family protein 0.04 OrthoFinder output from all 47 species
AT5G54490 PBP1 pinoid-binding protein 1 0.03 OrthoFinder output from all 47 species
Adi_g115388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g08583 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09810 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g15929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g23750 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g59479 PBP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16361.t1 PBP1, Aspi01Gene16361 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63044.t1 PBP1, Aspi01Gene63044 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G000200.1 Ceric.24G000200 not classified & original description: pacid=50629224... 0.05 OrthoFinder output from all 47 species
Ceric.24G000300.1 Ceric.24G000300 not classified & original description: pacid=50628799... 0.04 OrthoFinder output from all 47 species
Ceric.30G071000.1 Ceric.30G071000 not classified & original description: pacid=50608555... 0.04 OrthoFinder output from all 47 species
Ceric.30G075700.1 PBP1, Ceric.30G075700 not classified & original description: pacid=50608449... 0.05 OrthoFinder output from all 47 species
Ceric.30G075800.1 PBP1, Ceric.30G075800 not classified & original description: pacid=50608432... 0.05 OrthoFinder output from all 47 species
Dcu_g00624 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g00157 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g11470 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_17267 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_30618 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_30620 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g03020.1 LOC_Os02g03020 Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os06g46950.1 LOC_Os06g46950 Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10375806g0010 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_2285714g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g09084 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g26313 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020622 No alias not classified & original description: CDS=1-366 0.04 OrthoFinder output from all 47 species
Solyc02g079720.1.1 PBP1, Solyc02g079720 Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc10g006660.3.1 Solyc10g006660 Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc10g006700.1.1 Solyc10g006700 Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g57374 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013045_P001 Zm00001e013045 Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 47 97
No external refs found!