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  5. Aob_g02683

Aob_g02683


Description : component *(bS21c) of small plastid ribosomal-subunit proteome & original description: none


Gene families : OG0004103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004103_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g02683

Target Alias Description ECC score Gene Family Method Actions
AT3G27160 GHS1 Ribosomal protein S21 family protein 0.04 OrthoFinder output from all 47 species
Adi_g007754 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aev_g09196 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Aev_g48699 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Aop_g18482 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007465 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Cba_g08732 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.13G030700.1 Ceric.13G030700 component *(bS21c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Cre01.g017300 No alias Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Dac_g01906 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dcu_g41032 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Dde_g05601 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Ehy_g00353 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
LOC_Os02g09590.1 GHS1, LOC_Os02g09590 component mtRPS21|psRPS21 of mitochondrial ribosome... 0.02 OrthoFinder output from all 47 species
Len_g15740 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Lfl_g02717 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Lfl_g18474 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
MA_249305g0010 No alias component mtRPS21|psRPS21 of mitochondrial ribosome... 0.03 OrthoFinder output from all 47 species
Mp4g21580.1 No alias component mtRPS21|psRPS21 of mitochondrial ribosome... 0.07 OrthoFinder output from all 47 species
Ore_g01870 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ore_g05303 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007775 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Smo444102 No alias Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Solyc02g068090.3.1 GHS1, Solyc02g068090 component mtRPS21|psRPS21 of mitochondrial ribosome... 0.11 OrthoFinder output from all 47 species
Spa_g18473 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Zm00001e013920_P001 GHS1, Zm00001e013920 component mtRPS21|psRPS21 of mitochondrial ribosome... 0.02 OrthoFinder output from all 47 species
Zm00001e025066_P001 GHS1, Zm00001e025066 component mtRPS21|psRPS21 of mitochondrial ribosome... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001911 Ribosomal_S21 78 131
No external refs found!