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  5. Aob_g02995

Aob_g02995 (CLPR1, SVR2, NCLPP5)


Aliases : CLPR1, SVR2, NCLPP5

Description : non-proteolytic core component *(ClpR) of chloroplast Clp-type protease complex & original description: none


Gene families : OG0000988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000988_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g02995
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00207040 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
AMTR_s00164p00068000 CLPR1, SVR2,... Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
AT1G49970 CLPR1, SVR2, NCLPP5 CLP protease proteolytic subunit 1 0.05 OrthoFinder output from all 47 species
AT4G17040 CLPR4 CLP protease R subunit 4 0.03 OrthoFinder output from all 47 species
Adi_g019566 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Adi_g074670 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Aev_g07767 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.07 OrthoFinder output from all 47 species
Ala_g09550 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.04 OrthoFinder output from all 47 species
Aob_g01289 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Aop_g23397 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.04 OrthoFinder output from all 47 species
Aspi01Gene13918.t1 Aspi01Gene13918 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0037.g025925 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.02 OrthoFinder output from all 47 species
Azfi_s0279.g062250 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Cba_g08836 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Cba_g15422 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.04 OrthoFinder output from all 47 species
Cba_g25400 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Ceric.03G040500.1 CLPR1, SVR2,... non-proteolytic core component *(ClpR) of chloroplast... 0.07 OrthoFinder output from all 47 species
Ceric.23G012800.1 Ceric.23G012800 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Dac_g06754 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.04 OrthoFinder output from all 47 species
Dac_g10911 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Dcu_g02591 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Dcu_g11508 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.12 OrthoFinder output from all 47 species
Dcu_g17058 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.04 OrthoFinder output from all 47 species
Dde_g02711 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.08 OrthoFinder output from all 47 species
Dde_g03225 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.05 OrthoFinder output from all 47 species
Dde_g21817 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.05 OrthoFinder output from all 47 species
Ehy_g01031 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.02 OrthoFinder output from all 47 species
Ehy_g02196 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.02 OrthoFinder output from all 47 species
Ehy_g18668 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
GSVIVT01003696001 CLPR4 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01031146001 No alias Protein degradation.peptidase families.serine-type... 0.04 OrthoFinder output from all 47 species
Gb_12676 No alias non-proteolytic core component ClpR of chloroplast... 0.03 OrthoFinder output from all 47 species
Gb_40312 CLPR4 non-proteolytic core component ClpR of chloroplast... 0.05 OrthoFinder output from all 47 species
LOC_Os05g51450.1 CLPR1, SVR2,... non-proteolytic core component ClpR of chloroplast... 0.08 OrthoFinder output from all 47 species
Len_g08627 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.02 OrthoFinder output from all 47 species
Lfl_g01084 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.04 OrthoFinder output from all 47 species
Lfl_g01473 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
MA_10429819g0020 CLPR1, SVR2, NCLPP5 non-proteolytic core component ClpR of chloroplast... 0.03 OrthoFinder output from all 47 species
MA_80115g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8278512g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g18600.1 CLPR1, SVR2, NCLPP5 non-proteolytic core component ClpR of chloroplast... 0.02 OrthoFinder output from all 47 species
Msp_g05047 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.06 OrthoFinder output from all 47 species
Nbi_g04693 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Nbi_g05257 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.02 OrthoFinder output from all 47 species
Nbi_g11210 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.05 OrthoFinder output from all 47 species
Ore_g07323 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.04 OrthoFinder output from all 47 species
Pir_g12837 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.04 OrthoFinder output from all 47 species
Pnu_g07357 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Pnu_g12637 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Ppi_g09209 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004018 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007703 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Sam_g11367 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.02 OrthoFinder output from all 47 species
Sam_g16208 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Sam_g17176 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Sam_g52083 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.04 OrthoFinder output from all 47 species
Solyc01g099690.3.1 Solyc01g099690 non-proteolytic core component ClpR of chloroplast... 0.02 OrthoFinder output from all 47 species
Solyc10g049710.2.1 CLPR1, SVR2,... non-proteolytic core component ClpR of chloroplast... 0.03 OrthoFinder output from all 47 species
Spa_g11689 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.06 OrthoFinder output from all 47 species
Spa_g22875 CLPR4 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g02598 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.04 OrthoFinder output from all 47 species
Zm00001e017288_P001 CLPR4, Zm00001e017288 non-proteolytic core component ClpR of chloroplast... 0.02 OrthoFinder output from all 47 species
Zm00001e032571_P001 CLPR1, SVR2,... non-proteolytic core component ClpR of chloroplast... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 181 362
No external refs found!