Aob_g04025


Description : not classified & original description: none


Gene families : OG0006152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006152_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g04025
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Ala_g08842 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.20G040100.1 Ceric.20G040100 not classified & original description: pacid=50565962... 0.03 OrthoFinder output from all 47 species
Dac_g13925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11753 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g04356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g42960.1 LOC_Os02g42960 Thylakoid lumenal protein TL20.3, chloroplastic... 0.03 OrthoFinder output from all 47 species
Lfl_g11042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g12430.1 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.04 OrthoFinder output from all 47 species
Nbi_g05641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18142 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 172 207
IPR001646 5peptide_repeat 105 144
No external refs found!