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  5. Aob_g05873

Aob_g05873 (ATRBP31, CP31, ATRBP33, RBP31)


Aliases : ATRBP31, CP31, ATRBP33, RBP31

Description : not classified & original description: none


Gene families : OG0000715 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000715_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g05873
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271280 evm_27.TU.AmTr_v1... 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris 0.06 OrthoFinder output from all 47 species
AMTR_s00061p00032260 PDE322, CP33,... RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00148p00072380 evm_27.TU.AmTr_v1... 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris 0.02 OrthoFinder output from all 47 species
AMTR_s00166p00060690 ATRBP31, CP31,... RNA processing.organelle machineries.RNA... 0.05 OrthoFinder output from all 47 species
AT2G37220 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Adi_g019288 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022371 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022372 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g053286 CP31B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g00606 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g10264 ATRBP31, CP31,... plastidial ribonucleoprotein *(CP33a) & original... 0.09 OrthoFinder output from all 47 species
Ala_g12603 ATRBP31, CP31,... not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g08489 CP31B not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g10701 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g07142 ATRBP31, CP31,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14081 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12453.t1 Aspi01Gene12453 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0159.g053948 ATRBP31, CP31,... not classified & original description: CDS=143-1057 0.02 OrthoFinder output from all 47 species
Dcu_g01274 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g02644 ATRBP31, CP31,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g00421 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05473 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05650 ATRBP31, CP31,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10561 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_05747 PDE322, CP33 component psPSRP2 of small ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
Gb_28108 CP31B 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.02 OrthoFinder output from all 47 species
Gb_32176 No alias component psPSRP2 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
LOC_Os07g43810.1 LOC_Os07g43810 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g44290.1 ATRBP31, CP31,... RNA editing factor (CP31) 0.02 OrthoFinder output from all 47 species
LOC_Os09g39180.1 ATRBP31, CP31,... RNA editing factor (CP31) 0.03 OrthoFinder output from all 47 species
Lfl_g03865 ATRBP31, CP31,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434075g0010 CP31B component psPSRP2 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
MA_136464g0010 ATRBP31, CP31,... 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.02 OrthoFinder output from all 47 species
MA_474396g0010 ATRBP31, CP31,... RNA editing factor (CP31) 0.04 OrthoFinder output from all 47 species
MA_482994g0010 CP31B 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
MA_65183g0010 No alias component psPSRP2 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Mp8g03420.1 No alias 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.04 OrthoFinder output from all 47 species
Msp_g06420 ATRBP31, CP31,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02798 ATRBP31, CP31,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02906 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11334 CP31B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19962 CP31B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19963 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27196 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07061 ATRBP31, CP31,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g45791 No alias plastidial ribonucleoprotein *(CP33b) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g06203 No alias plastidial ribonucleoprotein *(CP33a) & original... 0.06 OrthoFinder output from all 47 species
Pnu_g33947 No alias plastidial ribonucleoprotein *(CP33a) & original... 0.07 OrthoFinder output from all 47 species
Pp3c12_9890V3.1 Pp3c12_9890 chloroplast RNA-binding protein 29 0.01 OrthoFinder output from all 47 species
Ppi_g02835 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021464 CP31B not classified & original description: CDS=19-840 0.02 OrthoFinder output from all 47 species
Sam_g06842 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g076840.3.1 Solyc08g076840 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.02 OrthoFinder output from all 47 species
Spa_g07687 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05046 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003947_P001 ATRBP31, CP31,... RNA editing factor (CP31) 0.02 OrthoFinder output from all 47 species
Zm00001e007101_P002 Zm00001e007101 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.02 OrthoFinder output from all 47 species
Zm00001e010844_P001 Zm00001e010844 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana... 0.02 OrthoFinder output from all 47 species
Zm00001e016211_P001 Zm00001e016211 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
Zm00001e032835_P001 PDE322, CP33,... RNA-binding protein CP33, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e033465_P001 ATRBP31, CP31,... RNA editing factor (CP31) 0.02 OrthoFinder output from all 47 species
Zm00001e035630_P001 Zm00001e035630 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 125 195
IPR000504 RRM_dom 222 292
No external refs found!