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  5. Aob_g05974

Aob_g05974


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g05974

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00127120 CRR22,... Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
Adi_g022043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g096783 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g104656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10029 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18512 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19052 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26204 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30196 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54766 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26992 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27296 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g42240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02020 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16831 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18871 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01012.t1 REME1, Aspi01Gene01012 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02406.t1 Aspi01Gene02406 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27421.t1 Aspi01Gene27421 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28051.t3 Aspi01Gene28051 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34954.t1 Aspi01Gene34954 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45825.t1 Aspi01Gene45825 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54730.t1 Aspi01Gene54730 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66060.t1 Aspi01Gene66060 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000621 No alias ssDNA-binding protein *(OSB) & original description: CDS=97-654 0.02 OrthoFinder output from all 47 species
Azfi_s0035.g025580 No alias not classified & original description: CDS=174-2462 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g030112 No alias not classified & original description: CDS=94-318 0.03 OrthoFinder output from all 47 species
Azfi_s0128.g048815 No alias not classified & original description: CDS=1-1722 0.03 OrthoFinder output from all 47 species
Azfi_s0301.g063681 REME1 not classified & original description: CDS=1-1416 0.03 OrthoFinder output from all 47 species
Azfi_s0332.g065427 No alias not classified & original description: CDS=1-3180 0.04 OrthoFinder output from all 47 species
Cba_g05792 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07679 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11358 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11914 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g13422 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19054 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35188 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67843 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g74968 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.39G023200.1 CRR2, Ceric.39G023200 not classified & original description: pacid=50582462... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g21707 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g19456 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38857 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g37552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50301 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22835 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025574001 No alias Pentatricopeptide repeat-containing protein At2g37320... 0.04 OrthoFinder output from all 47 species
LOC_Os05g38190.2 LOC_Os05g38190 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
Len_g04810 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g14748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25855 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07378 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07807 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08372 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g40267 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_7907g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
Msp_g11487 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g18215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g46446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g22460 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42335 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03469 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12166 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12890 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16145 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13334 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g42940 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006530 No alias not classified & original description: CDS=1-570 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008229 No alias not classified & original description: CDS=1-3597 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0133.g022243 No alias not classified & original description: CDS=1-1908 0.02 OrthoFinder output from all 47 species
Sam_g09072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18645 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22475 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27497 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50108 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo105356 No alias Pentatricopeptide repeat-containing protein At3g63370,... 0.02 OrthoFinder output from all 47 species
Smo5521 No alias Pentatricopeptide repeat-containing protein At4g30700... 0.02 OrthoFinder output from all 47 species
Smo92456 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Solyc09g065840.3.1 OSB1, Solyc09g065840 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Spa_g13906 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38609 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44841 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g48112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02687 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e033826_P001 Zm00001e033826 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004664 prephenate dehydratase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 371 396
IPR002885 Pentatricopeptide_repeat 270 292
IPR002885 Pentatricopeptide_repeat 472 495
IPR002885 Pentatricopeptide_repeat 167 191
IPR002885 Pentatricopeptide_repeat 296 342
IPR002885 Pentatricopeptide_repeat 397 443
IPR002885 Pentatricopeptide_repeat 94 142
IPR002885 Pentatricopeptide_repeat 194 242
No external refs found!