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  5. Aob_g06467

Aob_g06467 (DRT111)


Aliases : DRT111

Description : pre-mRNA splicing factor *(SFPS/DRT111) & original description: none


Gene families : OG0007273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007273_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g06467

Target Alias Description ECC score Gene Family Method Actions
Cre11.g467591 DRT111 RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder output from all 47 species
Len_g09639 DRT111 pre-mRNA splicing factor *(SFPS/DRT111) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016972 thiol oxidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0034975 protein folding in endoplasmic reticulum IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR000467 G_patch_dom 268 307
IPR000504 RRM_dom 346 408
No external refs found!