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  5. Aob_g06497

Aob_g06497


Description : not classified & original description: none


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g06497

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00200350 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g059746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05289 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g64152 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g09256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.24G054300.1 Ceric.24G054300 not classified & original description: pacid=50629415... 0.03 OrthoFinder output from all 47 species
Dde_g02239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03771 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_08026 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_12227 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g13554 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g27850.1 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Pir_g09717 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014397 No alias not classified & original description: CDS=1935-3293 0.02 OrthoFinder output from all 47 species
Sam_g15341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g045240.3.1 Solyc07g045240 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 102 161
IPR000504 RRM_dom 8 68
No external refs found!