1. Home
  2. Species
  3. Abrodictyum obscurum
  4. Sequence
  5. Aob_g07315

Aob_g07315


Description : EC_2.1 transferase transferring one-carbon group & original description: none


Gene families : OG0005139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005139_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g07315
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00267610 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
AT1G14030 No alias Rubisco methyltransferase family protein 0.05 OrthoFinder output from all 47 species
Adi_g013004 No alias EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Aev_g01078 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Aop_g68721 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Azfi_s0515.g074962 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ceric.11G013100.1 Ceric.11G013100 EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Cre16.g661350 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.06 OrthoFinder output from all 47 species
Dac_g15224 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Dcu_g13565 No alias EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Ehy_g02656 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
GSVIVT01003217001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Gb_38065 No alias lysine N-methyltransferase involved in RuBisCo regulation 0.03 OrthoFinder output from all 47 species
LOC_Os09g24530.1 LOC_Os09g24530 lysine N-methyltransferase involved in RuBisCo regulation 0.06 OrthoFinder output from all 47 species
Lfl_g11391 No alias EC_2.1 transferase transferring one-carbon group &... 0.11 OrthoFinder output from all 47 species
Ore_g28940 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Pir_g12136 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Pnu_g06656 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Smo139232 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Solyc05g013160.4.1 Solyc05g013160 lysine N-methyltransferase involved in RuBisCo regulation 0.03 OrthoFinder output from all 47 species
Spa_g09551 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Tin_g11444 No alias EC_2.1 transferase transferring one-carbon group &... 0.06 OrthoFinder output from all 47 species
Zm00001e034101_P002 Zm00001e034101 lysine N-methyltransferase involved in RuBisCo regulation 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR015353 Rubisco_LSMT_subst-bd 325 450
IPR001214 SET_dom 82 289
No external refs found!