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  5. Aob_g07321

Aob_g07321


Description : TCP-type transcription factor & original description: none


Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g07321
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00257890 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.09 OrthoFinder output from all 47 species
AMTR_s00017p00035550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
AT1G35560 No alias TCP family transcription factor 0.03 OrthoFinder output from all 47 species
AT3G47620 AtTCP14, TCP14 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.03 OrthoFinder output from all 47 species
Adi_g069116 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086308 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22689 No alias TCP-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g09029 No alias TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g02339 No alias TCP-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g26686 AT-TCP20, TCP20,... TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g69980.1 AT-TCP20, TCP20,... transcription factor (TCP). TCP20 circadian clock... 0.02 OrthoFinder output from all 47 species
MA_10428794g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_2101g0010 No alias transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
MA_762628g0010 No alias transcription factor (TCP) 0.06 OrthoFinder output from all 47 species
MA_96244g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Ore_g02657 No alias TCP-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g07074 No alias TCP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g23450 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g25887 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13050 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g27632 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016510 No alias TCP-type transcription factor & original description: CDS=1-2211 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0175.g024570 No alias TCP-type transcription factor & original description: CDS=1-1014 0.03 OrthoFinder output from all 47 species
Zm00001e003744_P001 Zm00001e003744 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Zm00001e030854_P001 Zm00001e030854 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 225 328
No external refs found!