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  5. Aob_g07366

Aob_g07366


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g07366
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AT4G20770 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G33990 EMB2758 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G06540 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003314 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003839 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004274 LPA66 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022043 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036651 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060857 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g095461 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g103893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18190 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05187 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g14569 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g17260 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g35872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07268 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19047 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19283 CRR2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24134 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33170 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55221 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g56508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g57869 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02630.t1 CRK8, Aspi01Gene02630 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14575.t2 CRR22, Aspi01Gene14575 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22046.t1 Aspi01Gene22046 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26858.t1 Aspi01Gene26858 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34036.t1 CRR22, Aspi01Gene34036 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34786.t1 Aspi01Gene34786 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37733.t1 Aspi01Gene37733 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61944.t1 OSB3, Aspi01Gene61944 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene67263.t1 CRR2, Aspi01Gene67263 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68665.t1 CRR22, Aspi01Gene68665 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70790.t1 Aspi01Gene70790 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0010.g012358 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2001 0.02 OrthoFinder output from all 47 species
Azfi_s0011.g012689 No alias not classified & original description: CDS=1-2352 0.02 OrthoFinder output from all 47 species
Azfi_s0033.g025112 No alias not classified & original description: CDS=1-2496 0.02 OrthoFinder output from all 47 species
Azfi_s0037.g025886 No alias not classified & original description: CDS=1-2634 0.02 OrthoFinder output from all 47 species
Azfi_s0073.g037188 CRR22 not classified & original description: CDS=1-1875 0.01 OrthoFinder output from all 47 species
Azfi_s0184.g056534 OTP84 not classified & original description: CDS=1-2040 0.03 OrthoFinder output from all 47 species
Azfi_s0256.g060514 No alias RecA-activity modulator *(RecX) & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g07505 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g13627 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g18809 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20164 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20881 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30008 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31665 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g54717 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67245 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67769 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.10G062000.1 Ceric.10G062000 ssDNA-binding protein *(OSB) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.21G046800.1 Ceric.21G046800 not classified & original description: pacid=50603820... 0.03 OrthoFinder output from all 47 species
Ceric.31G066800.1 Ceric.31G066800 not classified & original description: pacid=50573808... 0.02 OrthoFinder output from all 47 species
Ceric.37G044800.1 Ceric.37G044800 not classified & original description: pacid=50617007... 0.03 OrthoFinder output from all 47 species
Dac_g43504 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21324 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g36025 VAC1, ECB2, ATECB2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g38668 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g39633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g41962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g46395 EMB2758 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g48863 CRR2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05342 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05943 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g08525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36369 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13325 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23295 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25136 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023818001 CRR28 Pentatricopeptide repeat-containing protein At4g21065... 0.01 OrthoFinder output from all 47 species
Gb_38938 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
LOC_Os02g18810.1 LOC_Os02g18810 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os03g38580.1 EMB2261, LOC_Os03g38580 Pentatricopeptide repeat-containing protein At3g24000,... 0.01 OrthoFinder output from all 47 species
LOC_Os08g05750.1 LOC_Os08g05750 Pentatricopeptide repeat-containing protein At4g16835,... 0.03 OrthoFinder output from all 47 species
Len_g03808 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18953 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g33758 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04822 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05475 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06599 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07433 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28067 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38041 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g03152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03994 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g04473 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g04529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05679 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13610 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14067 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g19898 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g23135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31086 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g33667 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35200 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g44345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g19414 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g01899 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g13992 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g22808 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23126 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g36262 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06896 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12523 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57544 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05054 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g45723 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55456 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59344 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61267 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016434 No alias not classified & original description: CDS=1-1746 0.02 OrthoFinder output from all 47 species
Sam_g16542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21461 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g46501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo92456 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Smo98955 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Solyc01g108180.4.1 Solyc01g108180 RNA editing factor (MEF8). RNA editing factor (BLX) 0.02 OrthoFinder output from all 47 species
Solyc03g051780.3.1 Solyc03g051780 Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
Solyc04g016540.2.1 Solyc04g016540 Pentatricopeptide repeat-containing protein At2g39620... 0.01 OrthoFinder output from all 47 species
Solyc07g005170.3.1 Solyc07g005170 Pentatricopeptide repeat-containing protein At1g09410,... 0.01 OrthoFinder output from all 47 species
Spa_g00965 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g26548 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47727 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04120 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04675 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g32428 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140612 DNA damage sensor activity IEP HCCA
MF GO:0140664 ATP-dependent DNA damage sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 525 578
IPR002885 Pentatricopeptide_repeat 380 404
IPR002885 Pentatricopeptide_repeat 481 504
IPR002885 Pentatricopeptide_repeat 178 202
IPR002885 Pentatricopeptide_repeat 279 303
IPR002885 Pentatricopeptide_repeat 102 150
IPR002885 Pentatricopeptide_repeat 406 452
IPR002885 Pentatricopeptide_repeat 204 251
IPR002885 Pentatricopeptide_repeat 305 353
No external refs found!