Description : not classified & original description: none
Gene families : OG0001115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001115_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G27820 | No alias | Ribosomal L18p/L5e family protein | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g41050.1 | LOC_Os10g41050 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g09876 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g09449 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g29395 | No alias | component *(uL18m) of large mitoribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g111810.3.1 | Solyc01g111810 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e002321_P001 | Zm00001e002321 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| CC | GO:0005681 | spliceosomal complex | IEP | HCCA |
| CC | GO:0005839 | proteasome core complex | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| MF | GO:0008097 | 5S rRNA binding | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| CC | GO:0016272 | prefoldin complex | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005484 | Ribosomal_L18 | 70 | 186 |
| No external refs found! |
