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  5. Aob_g08190

Aob_g08190


Description : component *(bL19c) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0002345 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002345_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g08190
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00210720 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
AT4G17560 No alias Ribosomal protein L19 family protein 0.04 OrthoFinder output from all 47 species
Adi_g008057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g45795 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aop_g12532 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Aspi01Gene53327.t1 Aspi01Gene53327 component *(bL19c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.24G049700.1 Ceric.24G049700 component *(bL19c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Cre17.g734450 No alias 50S ribosomal protein L19, chloroplastic OS=Mesostigma viride 0.04 OrthoFinder output from all 47 species
Dac_g03571 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dcu_g09086 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Dde_g00499 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ehy_g05444 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g13874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01002112001 No alias Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Gb_05695 No alias component psRPL19 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
LOC_Os02g43600.1 LOC_Os02g43600 component psRPL19 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Lfl_g33279 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
MA_947876g0010 No alias 50S ribosomal protein L19-1, chloroplastic... 0.04 OrthoFinder output from all 47 species
Mp3g02740.1 No alias component mtRPL19 of large ribosomal subunit proteome.... 0.06 OrthoFinder output from all 47 species
Nbi_g00593 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ore_g04060 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Sam_g17563 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Solyc08g078010.3.1 Solyc08g078010 component psRPL19 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Spa_g04552 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Tin_g01651 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Zm00001e015296_P001 Zm00001e015296 component psRPL19 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR001857 Ribosomal_L19 125 217
No external refs found!