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  5. Aob_g09025

Aob_g09025 (ATTAP1, TAP1)


Aliases : ATTAP1, TAP1

Description : subfamily ABCB transporter & original description: none


Gene families : OG0001464 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001464_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g09025
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Cba_g02669 ATTAP1, TAP1 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G060800.1 ATTAP1, TAP1,... subfamily ABCB transporter & original description:... 0.03 OrthoFinder output from all 47 species
LOC_Os01g68330.1 ATTAP1, TAP1,... subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Pir_g12590 ATTAP1, TAP1 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g26811 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g070270.2.1 ATTAP1, TAP1,... subfamily ABCB transporter 0.08 OrthoFinder output from all 47 species
Tin_g03501 ATTAP1, TAP1 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e018873_P003 ATTAP1, TAP1,... subfamily ABCB transporter 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 211 474
IPR003439 ABC_transporter-like_ATP-bd 544 692
No external refs found!