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  5. Aob_g09030

Aob_g09030


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g09030

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00195340 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
AMTR_s00276p00017800 OTP81,... Pentatricopeptide repeat-containing protein At2g29760,... 0.02 OrthoFinder output from all 47 species
Adi_g013973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25481 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03230 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04459 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05105 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26442 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30558 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30819 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04342 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04924 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12813 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18332 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g19862 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g27362 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68696 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene29888.t1 Aspi01Gene29888 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36977.t1 Aspi01Gene36977 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene43851.t1 Aspi01Gene43851 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene61170.t1 OTP84, Aspi01Gene61170 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000167 No alias not classified & original description: CDS=1-1701 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011649 No alias not classified & original description: CDS=1-3195 0.02 OrthoFinder output from all 47 species
Azfi_s0010.g012298 No alias not classified & original description: CDS=1-3033 0.03 OrthoFinder output from all 47 species
Azfi_s0021.g015711 No alias not classified & original description: CDS=1-3111 0.03 OrthoFinder output from all 47 species
Azfi_s0033.g025102 No alias not classified & original description: CDS=1-3510 0.03 OrthoFinder output from all 47 species
Azfi_s0047.g030252 No alias not classified & original description: CDS=1-2775 0.04 OrthoFinder output from all 47 species
Azfi_s0048.g030525 No alias not classified & original description: CDS=1-2520 0.04 OrthoFinder output from all 47 species
Azfi_s0076.g037861 No alias not classified & original description: CDS=1-1125 0.03 OrthoFinder output from all 47 species
Azfi_s0118.g046610 OTP86 not classified & original description: CDS=1-2490 0.03 OrthoFinder output from all 47 species
Azfi_s0277.g061496 No alias not classified & original description: CDS=1-2121 0.03 OrthoFinder output from all 47 species
Azfi_s0345.g065835 No alias not classified & original description: CDS=1-1926 0.02 OrthoFinder output from all 47 species
Azfi_s0889.g091250 No alias not classified & original description: CDS=1-2652 0.03 OrthoFinder output from all 47 species
Cba_g05299 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45877 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g58730 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G002600.1 EMB2758, Ceric.02G002600 not classified & original description: pacid=50585462... 0.04 OrthoFinder output from all 47 species
Ceric.02G043000.1 Ceric.02G043000 not classified & original description: pacid=50585529... 0.04 OrthoFinder output from all 47 species
Ceric.03G031800.1 Ceric.03G031800 not classified & original description: pacid=50573080... 0.04 OrthoFinder output from all 47 species
Ceric.04G059600.1 Ceric.04G059600 not classified & original description: pacid=50632178... 0.04 OrthoFinder output from all 47 species
Ceric.06G014300.1 Ceric.06G014300 not classified & original description: pacid=50620883... 0.04 OrthoFinder output from all 47 species
Ceric.07G067800.1 Ceric.07G067800 not classified & original description: pacid=50627089... 0.04 OrthoFinder output from all 47 species
Ceric.13G052000.1 Ceric.13G052000 not classified & original description: pacid=50635571... 0.04 OrthoFinder output from all 47 species
Ceric.1Z148400.1 Ceric.1Z148400 not classified & original description: pacid=50637111... 0.03 OrthoFinder output from all 47 species
Ceric.23G042100.1 Ceric.23G042100 not classified & original description: pacid=50611070... 0.05 OrthoFinder output from all 47 species
Ceric.25G002100.1 Ceric.25G002100 not classified & original description: pacid=50593112... 0.04 OrthoFinder output from all 47 species
Ceric.25G017300.1 Ceric.25G017300 not classified & original description: pacid=50594270... 0.04 OrthoFinder output from all 47 species
Ceric.34G057600.1 Ceric.34G057600 not classified & original description: pacid=50623573... 0.04 OrthoFinder output from all 47 species
Ceric.35G030500.1 Ceric.35G030500 not classified & original description: pacid=50580789... 0.04 OrthoFinder output from all 47 species
Ceric.36G058800.1 Ceric.36G058800 not classified & original description: pacid=50569192... 0.04 OrthoFinder output from all 47 species
Dac_g29411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05682 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08223 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09513 MEF21 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g13254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16528 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16809 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17095 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18210 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g21328 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26715 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g37654 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g39805 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45929 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47941 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g51593 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g02941 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04408 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25754 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g42618 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20812 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_04402 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
Gb_17177 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_19040 No alias Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Gb_28664 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Gb_36839 OTP84 Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Gb_40766 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
LOC_Os02g50280.1 CRR22, LOC_Os02g50280 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
LOC_Os03g04390.1 LOC_Os03g04390 Pentatricopeptide repeat-containing protein At4g35130,... 0.03 OrthoFinder output from all 47 species
LOC_Os05g50950.1 LOC_Os05g50950 Pentatricopeptide repeat-containing protein At4g01030,... 0.02 OrthoFinder output from all 47 species
Len_g03900 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g08835 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g17336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18962 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18967 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06255 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41077 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41320 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g48594 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15560 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g21420 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38399 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g11784 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13332 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g54471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63804 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g02333 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g12786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23429 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g04611 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31283 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32250 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018323 No alias not classified & original description: CDS=1-1728 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019337 No alias not classified & original description: CDS=1-3108 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019397 No alias not classified & original description: CDS=1-2220 0.02 OrthoFinder output from all 47 species
Sam_g29713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo107700 CRR22 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Spa_g02192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06005 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14320 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16587 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22837 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23607 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23796 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50886 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52644 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55591 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06129 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06419 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g09963 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g29866 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 71 114
IPR002885 Pentatricopeptide_repeat 537 568
IPR002885 Pentatricopeptide_repeat 647 670
IPR002885 Pentatricopeptide_repeat 271 317
IPR002885 Pentatricopeptide_repeat 369 417
IPR002885 Pentatricopeptide_repeat 471 517
IPR002885 Pentatricopeptide_repeat 572 619
IPR002885 Pentatricopeptide_repeat 169 217
No external refs found!