Aob_g09048 (WRKY4)

Aliases : WRKY4

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g09048

Target	Alias	Description	ECC score	Gene Family Method
AT1G64000	WRKY56, ATWRKY56	WRKY DNA-binding protein 56	0.02	OrthoFinder output from all 47 species
Adi_g061046	WRKY9, ATWRKY9	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g117756	AtWRKY20, WRKY20	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g30573	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g33360	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g39192	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g42426	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g06726	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene27371.t1	WRKY4, Aspi01Gene27371	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene60875.t1	WRKY3, Aspi01Gene60875	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g30094	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g18512	WRKY3	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g21871	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g27429	WRKY72, ATWRKY72	WRKY-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Gb_20926	WRKY4	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Len_g10997	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g08550	WRKY48, ATWRKY48	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g06292	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g15358	WRKY4	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g24657	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g17523	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g25098	WRKY1, ZAP1, ATWRKY1	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g27505	WRKY4	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g40441	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g06217	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g08423	WRKY3	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g19052	WRKY53, ATWRKY53	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003023	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: CDS=1-1497	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014708	WRKY1, ZAP1, ATWRKY1	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020447	WRKY72, ATWRKY72	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020596	ATWRKY71, WRKY71	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023066	AtWRKY20, WRKY20	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Sam_g15258	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g15322	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g34683	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g38673	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g40618	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g52309	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc12g011200.3.1	WRKY28,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc12g014610.2.1	AtWRKY20,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Spa_g10733	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g16109	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g17851	WRKY48, ATWRKY48	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g37056	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g51917	No alias	A1-class (Pepsin) protease & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g20270	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0061630	ubiquitin protein ligase activity	IEP	HCCA
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	334	389
IPR003657	WRKY_dom	511	567

External Links

No external refs found!

Aob_g09048 (WRKY4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation