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  5. Aob_g09057

Aob_g09057


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g09057

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00155170 CRR2,... Pentatricopeptide repeat-containing protein At3g46790,... 0.02 OrthoFinder output from all 47 species
AMTR_s00008p00241920 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00252600 MEF1 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AT4G25270 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003785 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g007371 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g013973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015988 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g017329 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036802 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g068892 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080261 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101241 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g118106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g23767 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g17191 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g30557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05010 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g07004 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene17383.t1 OTP84, Aspi01Gene17383 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59237.t1 Aspi01Gene59237 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0033.g025112 No alias not classified & original description: CDS=1-2496 0.02 OrthoFinder output from all 47 species
Cba_g07466 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20848 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75094 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G121800.1 Ceric.01G121800 not classified & original description: pacid=50593016... 0.01 OrthoFinder output from all 47 species
Ceric.02G033100.1 Ceric.02G033100 not classified & original description: pacid=50586102... 0.02 OrthoFinder output from all 47 species
Ceric.02G080300.1 Ceric.02G080300 not classified & original description: pacid=50586181... 0.04 OrthoFinder output from all 47 species
Ceric.03G043000.1 Ceric.03G043000 not classified & original description: pacid=50572819... 0.02 OrthoFinder output from all 47 species
Ceric.04G078900.1 Ceric.04G078900 not classified & original description: pacid=50631863... 0.02 OrthoFinder output from all 47 species
Ceric.07G041800.1 Ceric.07G041800 not classified & original description: pacid=50626255... 0.02 OrthoFinder output from all 47 species
Ceric.12G028500.1 CRR22, Ceric.12G028500 not classified & original description: pacid=50602410... 0.03 OrthoFinder output from all 47 species
Ceric.13G001600.1 Ceric.13G001600 not classified & original description: pacid=50636694... 0.02 OrthoFinder output from all 47 species
Ceric.13G076400.1 Ceric.13G076400 not classified & original description: pacid=50635248... 0.02 OrthoFinder output from all 47 species
Ceric.18G049100.1 Ceric.18G049100 not classified & original description: pacid=50621467... 0.01 OrthoFinder output from all 47 species
Ceric.1Z090000.1 Ceric.1Z090000 not classified & original description: pacid=50604599... 0.03 OrthoFinder output from all 47 species
Ceric.25G047500.1 Ceric.25G047500 not classified & original description: pacid=50594463... 0.01 OrthoFinder output from all 47 species
Ceric.26G066800.1 EMB2758, Ceric.26G066800 not classified & original description: pacid=50599100... 0.02 OrthoFinder output from all 47 species
Ceric.28G056200.1 Ceric.28G056200 not classified & original description: pacid=50570685... 0.02 OrthoFinder output from all 47 species
Ceric.28G057800.1 REME1, Ceric.28G057800 not classified & original description: pacid=50570331... 0.01 OrthoFinder output from all 47 species
Ceric.30G075100.1 Ceric.30G075100 not classified & original description: pacid=50609517... 0.03 OrthoFinder output from all 47 species
Ceric.32G042800.1 Ceric.32G042800 not classified & original description: pacid=50598173... 0.03 OrthoFinder output from all 47 species
Ceric.32G067800.1 Ceric.32G067800 not classified & original description: pacid=50598256... 0.04 OrthoFinder output from all 47 species
Ceric.35G007000.1 Ceric.35G007000 not classified & original description: pacid=50581130... 0.03 OrthoFinder output from all 47 species
Ceric.38G046100.1 Ceric.38G046100 not classified & original description: pacid=50579564... 0.04 OrthoFinder output from all 47 species
Dcu_g38574 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g41962 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g43258 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g49987 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51283 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12128 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009974001 No alias Pentatricopeptide repeat-containing protein At3g26540... 0.02 OrthoFinder output from all 47 species
GSVIVT01010869001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
GSVIVT01018597001 No alias RNA processing.organelle machineries.RNA... 0.01 OrthoFinder output from all 47 species
Len_g03808 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18910 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g26311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g26581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07126 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07433 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10515 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g41072 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g11199 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g13610 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g22397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28534 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16027 REME1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g06449 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16061 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23480 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22600 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53382 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004087 No alias not classified & original description: CDS=796-2982 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004227 No alias not classified & original description: CDS=1-2520 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007046 No alias not classified & original description: CDS=1-2853 0.02 OrthoFinder output from all 47 species
Sam_g08130 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35116 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36251 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36269 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10182 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04113 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006474 N-terminal protein amino acid acetylation IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018206 peptidyl-methionine modification IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
CC GO:0031414 N-terminal protein acetyltransferase complex IEP HCCA
CC GO:0031417 NatC complex IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0072546 EMC complex IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 216 236
IPR046848 E_motif 764 815
IPR002885 Pentatricopeptide_repeat 343 391
IPR002885 Pentatricopeptide_repeat 544 590
IPR002885 Pentatricopeptide_repeat 140 188
IPR002885 Pentatricopeptide_repeat 645 692
IPR002885 Pentatricopeptide_repeat 243 288
IPR002885 Pentatricopeptide_repeat 444 491
No external refs found!