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  5. Lfl_g21962

Lfl_g21962


Description : not classified & original description: none


Gene families : OG0001109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g21962

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene49047.t1 PBP1, Aspi01Gene49047 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21484 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g33255 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_17267 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g57470.1 PBP1, LOC_Os01g57470 Calcium-binding protein PBP1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10375806g0010 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_2285714g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_25900g0020 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_6606267g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g19618 PBP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21757 PBP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g44428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12034 PBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g079720.1.1 PBP1, Solyc02g079720 Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc07g053050.1.1 Solyc07g053050 Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e025269_P001 Zm00001e025269 Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 43 97
No external refs found!