Description : component *(SYF2) of MAC spliceosome-associated complex & original description: none
Gene families : OG0003956 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003956_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aob_g10008 | |
| Cluster | HCCA: Cluster_153 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G16860 | No alias | GCIP-interacting family protein | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g23659 | No alias | component *(SYF2) of MAC spliceosome-associated complex... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g32098 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020693.8 | No alias | RNA processing.RNA splicing.spliceosome-associated... | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g07421 | No alias | component *(SYF2) of MAC spliceosome-associated complex... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g29172 | No alias | component *(SYF2) of MAC spliceosome-associated complex... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g35417 | No alias | component *(SYF2) of MAC spliceosome-associated complex... | 0.02 | OrthoFinder output from all 47 species | |
| Smo442403 | No alias | RNA processing.RNA splicing.spliceosome-associated... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc10g055640.2.1 | Solyc10g055640 | component SYF2 of non-snRNP MOS4-associated complex | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
| BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0023051 | regulation of signaling | IEP | HCCA |
| BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013260 | mRNA_splic_SYF2 | 166 | 313 |
| No external refs found! |
