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  5. Lfl_g22045

Lfl_g22045


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g22045

Target Alias Description ECC score Gene Family Method Actions
AT1G12440 No alias A20/AN1-like zinc finger family protein 0.03 OrthoFinder output from all 47 species
AT3G52800 No alias A20/AN1-like zinc finger family protein 0.02 OrthoFinder output from all 47 species
Adi_g058476 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g41232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08393.t1 Aspi01Gene08393 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64126.t2 Aspi01Gene64126 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G038300.1 Ceric.01G038300 not classified & original description: pacid=50591812... 0.02 OrthoFinder output from all 47 species
Ceric.35G033600.1 Ceric.35G033600 not classified & original description: pacid=50581057... 0.03 OrthoFinder output from all 47 species
Cre09.g400100 No alias Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Dac_g09022 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23645 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_28341 No alias Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
LOC_Os06g41010.1 LOC_Os06g41010 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
LOC_Os09g31200.1 LOC_Os09g31200 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Len_g03084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g21543 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_7224g0020 No alias Zinc finger A20 and AN1 domain-containing... 0.01 OrthoFinder output from all 47 species
Msp_g03357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g086960.3.1 Solyc01g086960 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Solyc11g061770.2.1 Solyc11g061770 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Spa_g12005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 159 194
IPR002653 Znf_A20 19 42
No external refs found!