Aliases : ATRABA2A, ATRAB11C, ATRAB-A2A, RAB-A2A, RAB11c
Description : A-class RAB GTPase & original description: none
Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aob_g10560 | |
| Cluster | HCCA: Cluster_176 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G31680 | AtRABA5d, RABA5d | RAB GTPase homolog A5D | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g17596 | ATRABA5C, ARA4,... | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g31350 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g30591 | RABA2b,... | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g36000 | ATRABA5C, ARA4,... | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g010022 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: CDS=217-867 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.16G022800.1 | AtRABA1f,... | A-class RAB GTPase & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020961.97 | AtRABA1e, RABA1e | Vesicle trafficking.regulation of membrane tethering and... | 0.01 | OrthoFinder output from all 47 species | |
| Cre03.g189250 | ATRABA2A,... | Vesicle trafficking.regulation of membrane tethering and... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g04872 | AtRABA5a, RABA5a | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g27746 | ARA-1, ATRABA5E,... | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g04229 | ARA-1, ATRABA5E,... | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g00471 | ATRABA5C, ARA4,... | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g62600.1 | ATRABA2A,... | A-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g01480.1 | ATRABA2A,... | A-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species | |
| MA_109703g0010 | AtRABA1f, RABA1f | A-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g09974 | ATRABA5C, ARA4,... | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g39136 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g04633 | RABA2b,... | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g04295 | AtRABA5b, RABA5b | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g19758 | ATRABA5C, ARA4,... | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g00826 | RABA2b,... | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g09438 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g30254 | No alias | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g52203 | No alias | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g07580 | AtRABA5a, RABA5a | A-class RAB GTPase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g04947 | RABA2b,... | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g27440 | ATRABA5C, ARA4,... | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003924 | GTPase activity | IEA | Interproscan |
| MF | GO:0005525 | GTP binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
| MF | GO:0005048 | signal sequence binding | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006621 | protein retention in ER lumen | IEP | HCCA |
| BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
| MF | GO:0008146 | sulfotransferase activity | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| MF | GO:0009055 | electron transfer activity | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| MF | GO:0016782 | transferase activity, transferring sulphur-containing groups | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| BP | GO:0032507 | maintenance of protein location in cell | IEP | HCCA |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
| MF | GO:0033218 | amide binding | IEP | HCCA |
| BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | HCCA |
| MF | GO:0042277 | peptide binding | IEP | HCCA |
| BP | GO:0045185 | maintenance of protein location | IEP | HCCA |
| CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| MF | GO:0046923 | ER retention sequence binding | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051235 | maintenance of location | IEP | HCCA |
| BP | GO:0051651 | maintenance of location in cell | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| CC | GO:0098798 | mitochondrial protein-containing complex | IEP | HCCA |
| CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001806 | Small_GTPase | 68 | 228 |
| No external refs found! |
