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  5. Aob_g12012

Aob_g12012 (GLR3.3, ATGLR3.3)


Aliases : GLR3.3, ATGLR3.3

Description : ligand-gated cation channel *(GLR) & original description: none


Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g12012

Target Alias Description ECC score Gene Family Method Actions
Adi_g104142 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20544 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14321 GLR2.7, ATGLR2.7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27181 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01804 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68675 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49371.t1 ATGLR3.5, GLR6,... ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71554.t1 ATGLR3.5, GLR6,... ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23137 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20777 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030602001 GLUR3, GLR3.4, ATGLR3.4 Solute transport.channels.GLR ligand-gated cation channel 0.02 OrthoFinder output from all 47 species
MA_23282g0010 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
MA_43501g0010 GLR3.3, ATGLR3.3 ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
Msp_g40693 GLR2.7, ATGLR2.7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22019 No alias ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29592 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g41989 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g47811 GLR2.7, ATGLR2.7 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42930 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57319 ATGLR3.1, GLR2,... ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60157 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62643 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g077290.2.1 ATGLR2.9,... ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
Solyc08g006500.4.1 GLR2.8,... ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated monoatomic ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 493 815
IPR001320 Iontro_rcpt_C 816 846
IPR001828 ANF_lig-bd_rcpt 53 410
No external refs found!