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  5. Aob_g12026

Aob_g12026


Description : component *(eL34) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000940 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000940_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g12026
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT1G26880 No alias Ribosomal protein L34e superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g049423 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Adi_g128643 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aob_g15690 RPL34 component *(eL34) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g25989 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g31513 RPL34 component *(eL34) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Azfi_s0045.g029897 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000632.3 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Cre16.g661050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Dcu_g20175 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g43816 RPL34 component *(eL34) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Dde_g15490 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
GSVIVT01011419001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
LOC_Os08g06040.1 LOC_Os08g06040 component RPL34 of LSU proteome component 0.02 OrthoFinder output from all 47 species
LOC_Os09g24690.1 LOC_Os09g24690 component RPL34 of LSU proteome component 0.02 OrthoFinder output from all 47 species
MA_109553g0010 No alias component RPL34 of LSU proteome component 0.02 OrthoFinder output from all 47 species
MA_175574g0010 No alias component RPL34 of LSU proteome component 0.03 OrthoFinder output from all 47 species
MA_7581523g0010 No alias component RPL34 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Mp4g17040.1 No alias component RPL34 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Msp_g09133 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pir_g53253 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pp3c11_2940V3.1 RPL34, Pp3c11_2940 Ribosomal protein L34e superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c1_1800V3.1 RPL34, Pp3c1_1800 Ribosomal protein L34e superfamily protein 0.02 OrthoFinder output from all 47 species
Pp3c25_11980V3.1 Pp3c25_11980 Ribosomal protein L34e superfamily protein 0.02 OrthoFinder output from all 47 species
Pp3c2_34570V3.1 Pp3c2_34570 Ribosomal protein L34e superfamily protein 0.02 OrthoFinder output from all 47 species
Pp3c7_21380V3.1 Pp3c7_21380 Ribosomal protein L34e superfamily protein 0.02 OrthoFinder output from all 47 species
Sam_g23757 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g44116 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR008195 Ribosomal_L34Ae 1 94
No external refs found!