Aliases : DCL4, ATDCL4
Description : endoribonuclease (DCL4) of transacting siRNA pathway & original description: none
Gene families : OG0000378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000378_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00026p00051870 | DCL4, ATDCL4,... | RNA biosynthesis.siRNA biogenesis.DRB4-DRB7.1 regulator... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00033p00127000 | ATDCL3, DCL3,... | RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease | 0.02 | OrthoFinder output from all 47 species | |
| AT1G01040 | DCL1, CAF,... | dicer-like 1 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G20320 | DCL4, ATDCL4 | dicer-like 4 | 0.02 | OrthoFinder output from all 47 species | |
| Als_g22807 | DCL1, CAF,... | endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.01G108700.1 | DCL4, ATDCL4,... | endoribonuclease (DCL4) of transacting siRNA pathway &... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08330 | DCL1, CAF,... | endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10432726g0010 | DCL1, CAF,... | Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp.... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g10412 | DCL1, CAF,... | endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g29457 | DCL4, ATDCL4 | endoribonuclease (DCL4) of transacting siRNA pathway &... | 0.03 | OrthoFinder output from all 47 species | |
| Smo444049 | DCL1, CAF,... | RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease | 0.04 | OrthoFinder output from all 47 species | |
| Smo86110 | DCL1, CAF,... | RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g005125.1.1 | DCL1, CAF,... | Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| No external refs found! |
