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  5. Lfl_g22329

Lfl_g22329 (AGL32, TT16, ABS)


Aliases : AGL32, TT16, ABS

Description : MADS/AGL-type transcription factor & original description: none


Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g22329

Target Alias Description ECC score Gene Family Method Actions
Adi_g051961 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17557 AGL16 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18223 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28879 AGL21 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G051800.1 GL19, AGL19,... MADS/AGL-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.14G038200.1 AGL87, Ceric.14G038200 MADS/AGL-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.16G005300.1 AGL65, Ceric.16G005300 MADS/AGL-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dde_g50123 AGL3, SEP4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12321 AGL16 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19814 AGL10, CAL1, CAL MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g36826 AGL65 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58877 AGL30 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo437868 AGL29 RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
Tin_g20318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002487 TF_Kbox 114 202
IPR002100 TF_MADSbox 10 57
No external refs found!