Aob_g13559 (ATHB13)

Aliases : ATHB13

Description : HD-ZIP I/II-type transcription factor & original description: none

Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g13559
Cluster	HCCA: Cluster_139

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00215130	ATHB5, ATHB-5,...	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
Aev_g07423	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g09308	ATHB40, HB40, HB-5	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Aev_g10709	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
Aspi01Gene20017.t1	ATHB3, HB-3,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene42458.t1	ATHB21, HB21,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene53135.t1	ATHB3, HB-3,...	HD-ZIP I/II-type transcription factor & original...	0.01	OrthoFinder output from all 47 species
Aspi01Gene58187.t1	Aspi01Gene58187	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g39032	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dcu_g17323	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ehy_g02341	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
GSVIVT01020033001	ATHB13	RNA biosynthesis.transcriptional activation.HB...	0.01	OrthoFinder output from all 47 species
GSVIVT01027407001	HB-7, ATHB-7, ATHB7	RNA biosynthesis.transcriptional activation.HB...	0.04	OrthoFinder output from all 47 species
LOC_Os03g07450.1	ATHB13, LOC_Os03g07450	transcription factor (HD-ZIP I/II)	0.01	OrthoFinder output from all 47 species
LOC_Os04g45810.1	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.01	OrthoFinder output from all 47 species
LOC_Os09g21180.1	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Len_g19610	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Len_g56176	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
MA_128g0010	ATHB13	transcription factor (HD-ZIP I/II)	0.07	OrthoFinder output from all 47 species
Nbi_g07247	ATHB21, HB21, HB-2	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ore_g07340	HB6, ATHB6	HD-ZIP I/II-type transcription factor & original...	0.01	OrthoFinder output from all 47 species
Ore_g21633	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g45630	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g19828	ATHB21, HB21, HB-2	HD-ZIP I/II-type transcription factor & original...	0.01	OrthoFinder output from all 47 species
Pir_g40617	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016096	ATHB5, ATHB-5, HB5	not classified & original description: CDS=182-1414	0.01	OrthoFinder output from all 47 species
Solyc02g086930.4.1	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Tin_g44726	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	80	134
IPR003106	Leu_zip_homeo	135	168

External Links

No external refs found!

Aob_g13559 (ATHB13)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation