Aob_g13877 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g13877

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00129p00082590 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g19720... 0.03 OrthoFinder output from all 47 species
AT3G20730 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G47840 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003262 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003806 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005534 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005755 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g011562 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g017104 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g020508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036768 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g046905 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057899 OSB3 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.02 OrthoFinder output from all 47 species
Adi_g059661 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060025 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060245 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g075132 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g083164 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086048 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117068 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04345 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24235 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27794 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03812 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g42240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04806.t1 Aspi01Gene04806 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene08005.t1 Aspi01Gene08005 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16552.t1 EMB2261, Aspi01Gene16552 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16559.t1 EMB2261, Aspi01Gene16559 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22090.t1 Aspi01Gene22090 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36332.t2 Aspi01Gene36332 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene38583.t1 PTAC9, OSB2,... ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene54509.t1 Aspi01Gene54509 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene65088.t1 Aspi01Gene65088 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65182.t1 OTP86, Aspi01Gene65182 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65777.t1 Aspi01Gene65777 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene68665.t1 CRR22, Aspi01Gene68665 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0743.g084788 No alias not classified & original description: CDS=1-1605 0.07 OrthoFinder output from all 47 species
Cba_g67802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G009700.1 VAC1, ECB2,... not classified & original description: pacid=50619980... 0.03 OrthoFinder output from all 47 species
Ceric.06G022800.1 Ceric.06G022800 not classified & original description: pacid=50620328... 0.02 OrthoFinder output from all 47 species
Ceric.23G075300.1 Ceric.23G075300 not classified & original description: pacid=50609898... 0.01 OrthoFinder output from all 47 species
Ceric.23G083100.1 Ceric.23G083100 ssDNA-binding protein *(OSB) & original description:... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000383.101 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g09743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22336 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g30279 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48807 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g02932 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03977 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05848 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09537 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16105 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g17562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22169 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22647 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50518 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008656001 No alias Pentatricopeptide repeat-containing protein At5g50990... 0.03 OrthoFinder output from all 47 species
Len_g07790 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g17544 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18576 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g26311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g33505 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g06226 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07128 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11975 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_103698g0030 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Nbi_g07548 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g17377 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57068 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g65840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23618 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g13926 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g29437 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g31303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33094 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002988 No alias not classified & original description: CDS=1-2412 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004479 No alias not classified & original description: CDS=197-3106 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007046 No alias not classified & original description: CDS=1-2853 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018665 No alias not classified & original description: CDS=8-2563 0.01 OrthoFinder output from all 47 species
Sam_g13864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16013 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g25324 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29063 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g30124 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34625 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34681 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36161 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g39339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo70183 OTP84 Pentatricopeptide repeat-containing protein At1g08070,... 0.02 OrthoFinder output from all 47 species
Tin_g02798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06686 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13649 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29962 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30032 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g31490 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g34283 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g37419 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 524 571
IPR002885 Pentatricopeptide_repeat 321 369
IPR002885 Pentatricopeptide_repeat 422 470
IPR002885 Pentatricopeptide_repeat 220 267
IPR002885 Pentatricopeptide_repeat 120 167
IPR002885 Pentatricopeptide_repeat 598 622
No external refs found!